Click on one of the clubs to see more information about that club.
| Team | National team | Founded | Number of players |
|---|---|---|---|
| Ajax Lasnamäe | - | 1993 | 0 |
| Ararat | - | 2025 | 0 |
| Elva | - | 2000 | 0 |
| Eston Villa | - | 2025 | 0 |
| Estonia | ⭐ | 1921 | 118 |
| Estonia (women) | ⭐ | 1921 | 19 |
| Estonia U17 | ⭐ | 1921 | 0 |
| Estonia U18 | ⭐ | 2025 | 0 |
| Estonia U19 | ⭐ | 1921 | 0 |
| Estonia U21 | ⭐ | 1921 | 25 |
| FC Levadia Tallinn | - | 1998 | 80 |
| FC Tallinn | - | 2020 | 0 |
| FCI Levadia II | - | 1998 | 0 |
| FCI Tallinn | - | 2002 | 17 |
| Flora | - | 2022 | 6 |
| Flora II | - | 1990 | 0 |
| Flora III | - | 2025 | 0 |
| Flora Tallinn | - | 1990 | 55 |
| Ganvix | - | 2025 | 0 |
| Hell Hunt | - | 2025 | 0 |
| Hiiumaa | - | 2017 | 0 |
| JK Tabasalu | - | 2012 | 0 |
| K-Järve JK Järve | - | 2013 | 0 |
| Kalju Nomme | - | 1997 | 95 |
| Keila | - | 1995 | 0 |
| Kiviõli Irbis | - | 1999 | 0 |
| Kuressaare | - | 1997 | 75 |
| Kuressaare II | - | 2025 | 0 |
| Laagri | - | 2009 | 48 |
| Läänemaa Haapsalu | - | 2023 | 0 |
| Legion | - | 2008 | 43 |
| Levadia U19 | - | 2021 | 15 |
| Lilleküla Retro | - | 2025 | 0 |
| Lootos | - | 2025 | 0 |
| Lootus | - | 1998 | 0 |
| Luunja | - | 2020 | 0 |
| Maardu | - | 1997 | 26 |
| Narva U19 | - | 2025 | 9 |
| Narva U21 | - | 1979 | 0 |
| Nõmme Kalju II | - | 1997 | 0 |
| Nõmme United | - | 2020 | 28 |
| Nõmme United II | - | 2025 | 0 |
| Orbiit | - | 1999 | 0 |
| Paide | - | 1990 | 118 |
| Paide II | - | 2022 | 0 |
| Pärnu | - | 2020 | 47 |
| Parnu JK Vaprus U21 | - | 2025 | 0 |
| Pärnu Sadam | - | 2025 | 0 |
| Põhja-Sakala | - | 2025 | 0 |
| Põhja-Tallinna JK Volta | - | 2025 | 0 |
| Puuma | - | 1981 | 0 |
| Rakvere Tarvas | - | 2004 | 29 |
| Raplamaa | - | 2021 | 0 |
| Rasmus Värki | - | 2025 | 2 |
| ReUnited Tallinn | - | 2020 | 2 |
| Saku Sporting | - | 2025 | 0 |
| Saue | - | 1998 | 0 |
| Sillamäe Kalev | - | 1951 | 37 |
| Smsraha | - | 2025 | 0 |
| Tabasalu Ulasabat | - | 2025 | 0 |
| Tallinna FC Zapoos | - | 2025 | 0 |
| Tallinna Kalev | - | 1911 | 100 |
| Tallinna Kalev II | - | 2020 | 0 |
| Tammeka | - | 2006 | 110 |
| Tammeka II | - | 2025 | 0 |
| Tartu Kalev | - | 2018 | 0 |
| Tartu Santos | - | 2002 | 17 |
| Tartu SK 10 | - | 1995 | 0 |
| Tartu Welco | - | 2021 | 0 |
| Team Helm | - | 2023 | 0 |
| Tervis | - | 2025 | 0 |
| TJK Legion II | - | 2023 | 0 |
| Trans Narva | - | 1979 | 116 |
| Tulevik | - | 1912 | 59 |
| Tulevik II | - | 1912 | 0 |
| Vändra | - | 2020 | 0 |
| Vaprus | - | 1922 | 48 |
| Viimsi | - | 2020 | 26 |
| Viljandi | - | 1992 | 0 |
| Warrior | - | 1997 | 0 |
| Zealot Sporting | - | 2025 | 0 |